Journal: Frontiers in Microbiology

Article Title: Designing Synergistic Biostimulants Formulation Containing Autochthonous Phosphate-Solubilizing Bacteria for Sustainable Wheat Production

doi: 10.3389/fmicb.2022.889073

Figure Lengend Snippet: Re-isolation and detection of inoculated P-solubilizing bacteria. The CLSM of wheat roots at 35 days post inoculation of P-solubilizing bacteria in the pot experiment under net house conditions. The FLUOS-labeled oligonucleotide probes showed green fluorescent signals for total bacterial population and Cy3-labeled oligonucleotide probes showed red fluorescent signals for inoculated Ochrobactrum sp. SSR. (A) Control treatments without inoculation and from the PSB inoculated pots with carrier materials (B) Biochar, (C) CM, (D) FM, and (E) HA after hybridizing with fluorescently labeled probes. The plant growth promoting traits of re-isolated PSB strains for their confirmation in comparison to pure PSB (F) . The plates depicting the re-isolated colonies of SSR, ZW32, and ZW9 from BC (G) , CM (H) , FM (I) and HA (J) in inoculated treatments. Enterobacter spp. ZW9, ZW32, Ochrobactrum sp. SSR. B, bacteria; RC, root cells.

Article Snippet: These PSB are non-pathogenic, compatible with each other and were also submitted to DSMZ ( https://www.dsmz.de/ ) culture collection under the accession numbers DSM 109610 and DSM 109592 , DSM 109593 for Ochrobactrum sp. SSR, Enterobacter sp. ZW9 and Enterobacter sp. ZW32, respectively.

Techniques: Isolation, Labeling

Journal: Antibiotics

Article Title: Characterization of the Bacteriophage-Derived Endolysins PlySs2 and PlySs9 with In Vitro Lytic Activity against Bovine Mastitis Streptococcus uberis

doi: 10.3390/antibiotics9090621

Figure Lengend Snippet: Reduction of the OD 600 of multiple subclinical (SUBCL) and clinical (CL) S. uberis strains and the references S. uberis 0140J and ATCC 27,958 after 1 h incubation at 37 °C with 0.5 µM of PlySs2 and PlySs9. S. uberis 0140J in PBS served as the negative control (NEG CTRL).

Article Snippet: The reference strain S. uberis ATCC 27,985 was additionally included.

Techniques: Incubation, Negative Control

Journal: International journal of systematic and evolutionary microbiology

Article Title: Massilia arenosa sp. nov., isolated from the soil of a cultivated maize field.

doi: 10.1099/ijsem.0.004266

Figure Lengend Snippet: Fig. 1. Maximum-likelihood phylogenetic tree created using mega 7 based on the most similar 16S rRNA gene sequence analysis using MC02T as the query sequence. The numbers at the nodes indicate bootstrap percentages (based on 1000 replications). Bootstrap values above 70 % are shown at the nods. Bar, 0.01 nucleotide exchanges per nucleotide positions. Escherichia coli ATCC 11886T was used to root the tree.

Article Snippet: Based on its metabolic, physiological and genomic characteristics, we propose that strain MC02T (NRRL B-65554T=ATCC TSD-200T=LMG 31737T) represents a novel species of the genus Massilia with the name Massilia arenosa sp. nov.

Techniques: Sequencing

Journal: International journal of systematic and evolutionary microbiology

Article Title: Massilia arenosa sp. nov., isolated from the soil of a cultivated maize field.

doi: 10.1099/ijsem.0.004266

Figure Lengend Snippet: Fig. 2. Non-metric multidimensional scaling plot based on the Biolog results of MC02T and similar species based on a 16S rRNA gene blast and other type strains of the Oxalobacteraceae. The isolate information is given in Table S1.

Article Snippet: Based on its metabolic, physiological and genomic characteristics, we propose that strain MC02T (NRRL B-65554T=ATCC TSD-200T=LMG 31737T) represents a novel species of the genus Massilia with the name Massilia arenosa sp. nov.

Techniques:

Journal: Scientific Reports

Article Title: Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07

doi: 10.1038/srep21863

Figure Lengend Snippet: ( a ) Structure of cellulose synthesis-related gene clusters from Enterobacter sp. FY-07, Enterobacter sp. 638 and G. xylinum ATCC 53582; ( b ) Effects of gene-knockout on the cellulose production of Enterobacter sp. FY-07. ( c ) The bacterial cellulose (BC) production ability of Enterobacter sp. FY-07 gene knockout mutants under aerobic and anaerobic conditions.

Article Snippet: To investigate whether the different oxygen demands lead to the different BC synthesis mechanisms between G. xylinus ATCC 53582 and Enterobacter sp. FY-07 or why Enterobacter sp. FY-07 has the different BC production ability with Enterobacter sp. 638, the protein homology, arrangement and constitution of the genes involved in the cluster were compared among Enterobacter sp. FY-07, Enterobacter sp. 638 and G. xylinum ATCC 53582.

Techniques: Gene Knockout

Journal: Scientific Reports

Article Title: Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07

doi: 10.1038/srep21863

Figure Lengend Snippet: ( a ) Cell growth, BC production and glucose comsumption of Enterobacter sp. FY-07. ( b ) Metabolite quantitative analysis of Enterobacter sp. FY-07 in fermentation medium under aerobic and anaerobic conditions. Data indicate the means ± standard deviations from three independent experiments performed in triplicate.

Article Snippet: To investigate whether the different oxygen demands lead to the different BC synthesis mechanisms between G. xylinus ATCC 53582 and Enterobacter sp. FY-07 or why Enterobacter sp. FY-07 has the different BC production ability with Enterobacter sp. 638, the protein homology, arrangement and constitution of the genes involved in the cluster were compared among Enterobacter sp. FY-07, Enterobacter sp. 638 and G. xylinum ATCC 53582.

Techniques:

Journal: Scientific Reports

Article Title: Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07

doi: 10.1038/srep21863

Figure Lengend Snippet: Strains and plasmids used in this study.

Article Snippet: To investigate whether the different oxygen demands lead to the different BC synthesis mechanisms between G. xylinus ATCC 53582 and Enterobacter sp. FY-07 or why Enterobacter sp. FY-07 has the different BC production ability with Enterobacter sp. 638, the protein homology, arrangement and constitution of the genes involved in the cluster were compared among Enterobacter sp. FY-07, Enterobacter sp. 638 and G. xylinum ATCC 53582.

Techniques:

Journal: Letters in Applied Microbiology

Article Title: Cadmium‐tolerant bacteria: current trends and applications in agriculture

doi: 10.1111/lam.13594

Figure Lengend Snippet: Some examples of culturable and viable cadmium‐tolerant bacteria/yeast/algae showed by the tolerance mechanism and the associated crop/niche system where they were isolated

Article Snippet: , Enterobacter sp. , Industry wastewater treatment plant , Lu et al . ( ) .

Techniques: Bacteria, Algae, Residue, Bioleaching